Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Gm12957-201ENSMUST00000117835 377 ntBASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx6-1Q99MA9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm15393-201ENSMUST00000120499 219 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx6-1Q99MA9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx6-1Q99MA9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms