Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf3Q99LI7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cstf3Q99LI7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf3Q99LI7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms