Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gm13015-201ENSMUST00000118674 204 ntBASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gm24158-201ENSMUST00000175263 71 ntBASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha9Q91Y11 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm29310-201ENSMUST00000185468 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21825-201ENSMUST00000185728 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm29109-201ENSMUST00000185895 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21896-201ENSMUST00000186520 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21873-201ENSMUST00000186728 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21794-201ENSMUST00000187056 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21880-201ENSMUST00000187275 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21826-201ENSMUST00000187451 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21198-201ENSMUST00000188393 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21749-201ENSMUST00000189343 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21901-201ENSMUST00000189568 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm29424-201ENSMUST00000189716 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm28599-201ENSMUST00000189838 694 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21867-201ENSMUST00000189917 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm29269-201ENSMUST00000190087 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21722-201ENSMUST00000190153 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm28423-201ENSMUST00000190701 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21899-201ENSMUST00000190745 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21910-201ENSMUST00000191163 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21849-201ENSMUST00000191571 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm28678-201ENSMUST00000191593 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm20910-201ENSMUST00000193268 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm10253-201ENSMUST00000194270 940 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gm21871-201ENSMUST00000194621 696 ntBASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha9Q91Y11 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms