Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Olfr286-202ENSMUST00000205305 969 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Gm5779-201ENSMUST00000218467 910 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm44872-201ENSMUST00000207864 420 ntBASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb2Q91Y00 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Mir6956-201ENSMUST00000183598 62 ntBASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb2Q91Y00 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdhb2Q91Y00 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gm8410-201ENSMUST00000117225 605 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb2Q91Y00 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms