Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 AC154245.1-201ENSMUST00000224615 601 ntBASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Gm42822-201ENSMUST00000200507 1529 ntBASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb20Q91XZ9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm12073-201ENSMUST00000117382 524 ntBASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm6461-201ENSMUST00000120015 633 ntBASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm5312-201ENSMUST00000203728 547 ntBASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm44760-201ENSMUST00000206375 1173 ntBASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb20Q91XZ9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms