Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb4Q91XZ6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb4Q91XZ6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb4Q91XZ6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms