Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Gm27494-201ENSMUST00000184735 189 ntBASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Rprl2-201ENSMUST00000157150 290 ntBASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb6Q91XZ4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb6Q91XZ4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Mir1895-201ENSMUST00000122615 79 ntBASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb6Q91XZ4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms