Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.94□□□□□ -0.34
Pcdhga3Q91XY5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gm13597-201ENSMUST00000121239 375 ntBASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gm9727-201ENSMUST00000161387 555 ntBASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gm44771-201ENSMUST00000206975 626 ntBASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Gm18206-201ENSMUST00000207027 926 ntBASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhga3Q91XY5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhga3Q91XY5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms