Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Tram1Q91V04 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.49□□□□□ -0.41
Tram1Q91V04 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.49□□□□□ -0.41
Tram1Q91V04 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.49□□□□□ -0.41
Tram1Q91V04 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.49□□□□□ -0.41
Tram1Q91V04 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tram1Q91V04 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.49□□□□□ -0.41
Tram1Q91V04 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Tram1Q91V04 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.48□□□□□ -0.41
Tram1Q91V04 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tram1Q91V04 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm14042-201ENSMUST00000120139 833 ntBASIC12.47□□□□□ -0.41
Tram1Q91V04 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm17808-201ENSMUST00000200859 894 ntBASIC12.47□□□□□ -0.41
Tram1Q91V04 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.47□□□□□ -0.41
Tram1Q91V04 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tram1Q91V04 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.47□□□□□ -0.41
Tram1Q91V04 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Tram1Q91V04 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tram1Q91V04 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms