Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Gm8000-201ENSMUST00000188378 592 ntBASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf8Q8VC56 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm23547-201ENSMUST00000158210 271 ntBASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Mir8117-201ENSMUST00000184773 107 ntBASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf8Q8VC56 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14□□□□□ -0.17
Rnf8Q8VC56 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Gm15467-201ENSMUST00000120582 445 ntBASIC14□□□□□ -0.17
Rnf8Q8VC56 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf8Q8VC56 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14□□□□□ -0.17
Rnf8Q8VC56 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf8Q8VC56 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms