Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Gm27702-201ENSMUST00000184512 56 ntBASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpap2Q8VC34 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpap2Q8VC34 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Gm43125-201ENSMUST00000201724 730 ntBASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpap2Q8VC34 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm43474-201ENSMUST00000196415 774 ntBASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpap2Q8VC34 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms