Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps39Q8R5L3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Mzt1-203ENSMUST00000227948 952 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps39Q8R5L3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms