Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.83■□□□□ 0.61
Ddx54Q8K4L0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Gm10275-202ENSMUST00000168697 495 ntBASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Gm38266-201ENSMUST00000194931 421 ntBASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Gm10275-201ENSMUST00000092620 635 ntBASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx54Q8K4L0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm11524-201ENSMUST00000119349 807 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm13689-201ENSMUST00000119360 685 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Mir5132-201ENSMUST00000175166 71 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm24196-201ENSMUST00000179161 110 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm29199-201ENSMUST00000187766 775 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm18905-201ENSMUST00000205454 928 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm45930-201ENSMUST00000221330 292 ntBASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx54Q8K4L0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gm16177-201ENSMUST00000120728 718 ntBASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gm37714-201ENSMUST00000194742 342 ntBASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gm19184-201ENSMUST00000196798 928 ntBASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Gm7783-201ENSMUST00000204795 781 ntBASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx54Q8K4L0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms