Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lrrtm1Q8K377 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lrrtm1Q8K377 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms