Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn1Q8K0T0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Gm14042-201ENSMUST00000120139 833 ntBASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Gm43474-201ENSMUST00000196415 774 ntBASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Gm25007-201ENSMUST00000083808 133 ntBASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rtn1Q8K0T0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn1Q8K0T0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn1Q8K0T0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Gm25287-201ENSMUST00000103846 110 ntBASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Gm22918-201ENSMUST00000103855 110 ntBASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms