Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm6973-201ENSMUST00000117080 721 ntBASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm13464-201ENSMUST00000119418 935 ntBASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm18057-201ENSMUST00000208220 503 ntBASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfwd3Q8CIK8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Rprl2-201ENSMUST00000157150 290 ntBASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfwd3Q8CIK8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rfwd3Q8CIK8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rfwd3Q8CIK8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm15483-201ENSMUST00000120338 456 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms