Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gm2451-201ENSMUST00000199447 999 ntBASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gm10290-201ENSMUST00000200451 999 ntBASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Mzt1-203ENSMUST00000227948 952 ntBASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim5Q8CI51 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Psmb5-202ENSMUST00000227257 622 ntBASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim5Q8CI51 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gm27301-201ENSMUST00000184012 127 ntBASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.34□□□□□ -0.27
Pdlim5Q8CI51 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim5Q8CI51 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim5Q8CI51 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim5Q8CI51 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms