Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Gm6888-201ENSMUST00000221983 706 ntBASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gm12428-201ENSMUST00000119844 727 ntBASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gm5479-201ENSMUST00000160578 435 ntBASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbm28Q8CGC6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rbm28Q8CGC6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rbm28Q8CGC6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Mir6977-201ENSMUST00000184960 64 ntBASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.14■□□□□ 0.33
Rbm28Q8CGC6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbm28Q8CGC6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms