Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup88Q8CEC0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Rprl2-201ENSMUST00000157150 290 ntBASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nup88Q8CEC0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Gm16198-201ENSMUST00000118766 670 ntBASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup88Q8CEC0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Gm18889-201ENSMUST00000174284 929 ntBASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Nup88Q8CEC0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms