Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Gm14701-201ENSMUST00000117156 348 ntBASIC15.29■□□□□ 0.04
Uba3Q8C878 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.28■□□□□ 0.04
Uba3Q8C878 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Uba3Q8C878 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.28■□□□□ 0.04
Uba3Q8C878 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.28■□□□□ 0.04
Uba3Q8C878 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.28■□□□□ 0.04
Uba3Q8C878 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.28■□□□□ 0.04
Uba3Q8C878 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
Uba3Q8C878 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba3Q8C878 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.27■□□□□ 0.04
Uba3Q8C878 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.27■□□□□ 0.04
Uba3Q8C878 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Gm5312-201ENSMUST00000203728 547 ntBASIC15.27■□□□□ 0.04
Uba3Q8C878 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba3Q8C878 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.27■□□□□ 0.03
Uba3Q8C878 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Uba3Q8C878 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.27■□□□□ 0.03
Uba3Q8C878 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba3Q8C878 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.26■□□□□ 0.03
Uba3Q8C878 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.26■□□□□ 0.03
Uba3Q8C878 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Uba3Q8C878 Gm13015-201ENSMUST00000118674 204 ntBASIC15.26■□□□□ 0.03
Uba3Q8C878 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Uba3Q8C878 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.26■□□□□ 0.03
Uba3Q8C878 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba3Q8C878 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms