Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim9Q8C7M3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Nudt18-203ENSMUST00000228768 1578 ntBASIC16■□□□□ 0.15
Trim9Q8C7M3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16■□□□□ 0.15
Trim9Q8C7M3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Rprl2-201ENSMUST00000157150 290 ntBASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm27494-201ENSMUST00000184735 189 ntBASIC16■□□□□ 0.15
Trim9Q8C7M3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim9Q8C7M3 Gm13332-201ENSMUST00000120451 1398 ntBASIC16■□□□□ 0.15
Trim9Q8C7M3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.99■□□□□ 0.15
Trim9Q8C7M3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim9Q8C7M3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim9Q8C7M3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms