Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptcd1Q8C2E4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.83■□□□□ 0.45
Ptcd1Q8C2E4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm29310-201ENSMUST00000185468 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21825-201ENSMUST00000185728 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm29109-201ENSMUST00000185895 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21896-201ENSMUST00000186520 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21873-201ENSMUST00000186728 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21794-201ENSMUST00000187056 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21880-201ENSMUST00000187275 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21826-201ENSMUST00000187451 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21198-201ENSMUST00000188393 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21749-201ENSMUST00000189343 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21901-201ENSMUST00000189568 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm29424-201ENSMUST00000189716 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm28599-201ENSMUST00000189838 694 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21867-201ENSMUST00000189917 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm29269-201ENSMUST00000190087 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21722-201ENSMUST00000190153 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm28423-201ENSMUST00000190701 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21899-201ENSMUST00000190745 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21910-201ENSMUST00000191163 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21849-201ENSMUST00000191571 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm28678-201ENSMUST00000191593 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm20910-201ENSMUST00000193268 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm21871-201ENSMUST00000194621 696 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptcd1Q8C2E4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Gm11425-201ENSMUST00000119608 498 ntBASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Gm21854-201ENSMUST00000179901 471 ntBASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Gm9396-201ENSMUST00000076703 567 ntBASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptcd1Q8C2E4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.81■□□□□ 0.44
Ptcd1Q8C2E4 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms