Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm18057-201ENSMUST00000208220 503 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trub1Q8C0D0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.96□□□□□ -0.01
Trub1Q8C0D0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trub1Q8C0D0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.96□□□□□ -0.02
Trub1Q8C0D0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms