Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp47Q8BY87 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp47Q8BY87 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Usp47Q8BY87 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp47Q8BY87 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Gm45504-201ENSMUST00000211407 2107 ntBASIC20.39■□□□□ 0.85
Usp47Q8BY87 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp47Q8BY87 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp47Q8BY87 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.37■□□□□ 0.85
Usp47Q8BY87 Gm44981-201ENSMUST00000205549 1943 ntBASIC20.37■□□□□ 0.85
Usp47Q8BY87 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp47Q8BY87 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Gm16215-201ENSMUST00000161990 637 ntBASIC20.36■□□□□ 0.85
Usp47Q8BY87 Gm33320-201ENSMUST00000192232 530 ntBASIC20.36■□□□□ 0.85
Usp47Q8BY87 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp47Q8BY87 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms