Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc30Q8BVF4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Mir6990-201ENSMUST00000183724 91 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm38225-201ENSMUST00000194001 393 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm44335-201ENSMUST00000196879 141 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm44297-201ENSMUST00000198304 141 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm44346-201ENSMUST00000198851 141 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Chchd1-203ENSMUST00000224633 557 ntBASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc30Q8BVF4 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Gm13015-201ENSMUST00000118674 204 ntBASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc30Q8BVF4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc30Q8BVF4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Gm43125-201ENSMUST00000201724 730 ntBASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc30Q8BVF4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms