Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm8410-201ENSMUST00000117225 605 ntBASIC14.85□□□□□ -0.03
Nup54Q8BTS4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm27622-201ENSMUST00000183779 60 ntBASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nup54Q8BTS4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 AA543401-201ENSMUST00000164248 1269 ntBASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gm27618-201ENSMUST00000183671 60 ntBASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup54Q8BTS4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Nup54Q8BTS4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup54Q8BTS4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup54Q8BTS4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup54Q8BTS4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Gm6222-201ENSMUST00000120787 396 ntBASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup54Q8BTS4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Gm27631-201ENSMUST00000184163 466 ntBASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.82□□□□□ -0.04
Nup54Q8BTS4 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms