Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scfd1Q8BRF7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm22189-201ENSMUST00000103822 86 ntBASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm12585-201ENSMUST00000117307 290 ntBASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm15460-201ENSMUST00000118147 391 ntBASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm15957-201ENSMUST00000118893 974 ntBASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scfd1Q8BRF7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scfd1Q8BRF7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Gm12859-201ENSMUST00000117834 427 ntBASIC16.51■□□□□ 0.23
Scfd1Q8BRF7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms