Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gm16198-201ENSMUST00000118766 670 ntBASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4Q8BQZ5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm9385-201ENSMUST00000117563 472 ntBASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm17271-201ENSMUST00000165535 355 ntBASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm6736-201ENSMUST00000166583 948 ntBASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cpsf4Q8BQZ5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.08□□□□□ -0.15
Cpsf4Q8BQZ5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4Q8BQZ5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4Q8BQZ5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Gm2756-201ENSMUST00000195851 400 ntBASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4Q8BQZ5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms