Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm11803-201ENSMUST00000119966 444 ntBASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm7399-201ENSMUST00000032395 858 ntBASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Gm12329-201ENSMUST00000120829 1007 ntBASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Mir8109-201ENSMUST00000184375 117 ntBASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col16a1Q8BLX7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm29649-201ENSMUST00000185649 419 ntBASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm18827-201ENSMUST00000188341 790 ntBASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col16a1Q8BLX7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 CU024892.2-201ENSMUST00000224608 832 ntBASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.69■□□□□ 0.58
Col16a1Q8BLX7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm27772-201ENSMUST00000184900 187 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm5370-201ENSMUST00000187187 574 ntBASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.68■□□□□ 0.58
Col16a1Q8BLX7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms