Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh20Q8BIZ0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm18246-201ENSMUST00000221023 728 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm10175-201ENSMUST00000086013 645 ntBASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh20Q8BIZ0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms