Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.91□□□□□ -0.18
SynbQ8BI41 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.91□□□□□ -0.18
SynbQ8BI41 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.91□□□□□ -0.18
SynbQ8BI41 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
SynbQ8BI41 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SynbQ8BI41 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Gm2810-201ENSMUST00000118681 990 ntBASIC13.9□□□□□ -0.18
SynbQ8BI41 Gm11543-201ENSMUST00000120758 370 ntBASIC13.9□□□□□ -0.18
SynbQ8BI41 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.9□□□□□ -0.18
SynbQ8BI41 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.9□□□□□ -0.18
SynbQ8BI41 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
SynbQ8BI41 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SynbQ8BI41 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SynbQ8BI41 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
SynbQ8BI41 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.89□□□□□ -0.19
SynbQ8BI41 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Gm5745-201ENSMUST00000183748 313 ntBASIC13.89□□□□□ -0.19
SynbQ8BI41 Gm27306-201ENSMUST00000183970 107 ntBASIC13.89□□□□□ -0.19
SynbQ8BI41 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SynbQ8BI41 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.89□□□□□ -0.19
SynbQ8BI41 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SynbQ8BI41 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SynbQ8BI41 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SynbQ8BI41 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SynbQ8BI41 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms