Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Gm16198-201ENSMUST00000118766 670 ntBASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn3Q8BHH8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm8000-201ENSMUST00000188378 592 ntBASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn3Q8BHH8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Gm11779-201ENSMUST00000118541 368 ntBASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Gm17271-201ENSMUST00000165535 355 ntBASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 AW822252-206ENSMUST00000208904 237 ntBASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms