Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim6Q8BGE7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim6Q8BGE7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim6Q8BGE7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim6Q8BGE7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim6Q8BGE7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.43■□□□□ 0.06
Trim6Q8BGE7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim6Q8BGE7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Gm7787-201ENSMUST00000216858 688 ntBASIC15.42■□□□□ 0.06
Trim6Q8BGE7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Trim6Q8BGE7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.42■□□□□ 0.06
Trim6Q8BGE7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms