Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.04□□□□□ -0.16
Trim36Q80WG7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim36Q80WG7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.04□□□□□ -0.16
Trim36Q80WG7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.04□□□□□ -0.16
Trim36Q80WG7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.04□□□□□ -0.16
Trim36Q80WG7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim36Q80WG7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.03□□□□□ -0.16
Trim36Q80WG7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.03□□□□□ -0.16
Trim36Q80WG7 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.03□□□□□ -0.16
Trim36Q80WG7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim36Q80WG7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim36Q80WG7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.02□□□□□ -0.17
Trim36Q80WG7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim36Q80WG7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim36Q80WG7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms