Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prdm4Q80V63 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prdm4Q80V63 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prdm4Q80V63 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.15■□□□□ 0.02
Prdm4Q80V63 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.14■□□□□ 0.01
Prdm4Q80V63 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm25745-201ENSMUST00000174945 133 ntBASIC15.14■□□□□ 0.01
Prdm4Q80V63 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.14■□□□□ 0.01
Prdm4Q80V63 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.14■□□□□ 0.01
Prdm4Q80V63 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prdm4Q80V63 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.13■□□□□ 0.01
Prdm4Q80V63 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm28659-201ENSMUST00000188013 759 ntBASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm34391-201ENSMUST00000203706 907 ntBASIC15.13■□□□□ 0.01
Prdm4Q80V63 Gm8655-201ENSMUST00000221159 852 ntBASIC15.13■□□□□ 0.01
Prdm4Q80V63 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.13■□□□□ 0.01
Prdm4Q80V63 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prdm4Q80V63 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prdm4Q80V63 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms