Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Gm9719-201ENSMUST00000162765 543 ntBASIC15.88■□□□□ 0.13
Ush1gQ80T11 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm13464-201ENSMUST00000119418 935 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm24694-201ENSMUST00000180054 110 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm27663-201ENSMUST00000184839 110 ntBASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ush1gQ80T11 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm5566-201ENSMUST00000116118 459 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm12490-201ENSMUST00000120255 560 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Gm18187-201ENSMUST00000196476 984 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.86■□□□□ 0.13
Ush1gQ80T11 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ush1gQ80T11 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ush1gQ80T11 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms