Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh8Q7TSK3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh8Q7TSK3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gm13223-201ENSMUST00000118609 747 ntBASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gm38294-201ENSMUST00000192831 381 ntBASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh8Q7TSK3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm12151-201ENSMUST00000121374 290 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh8Q7TSK3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Gm27989-201ENSMUST00000184721 107 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.31□□□□□ -0.12
Pcdh8Q7TSK3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms