Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TwistnbQ78WZ7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TwistnbQ78WZ7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Gm6296-201ENSMUST00000222599 943 ntBASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TwistnbQ78WZ7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TwistnbQ78WZ7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Mir6982-201ENSMUST00000184354 68 ntBASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TwistnbQ78WZ7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TwistnbQ78WZ7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms