Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vma21Q78T54 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Vma21Q78T54 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm34391-201ENSMUST00000203706 907 ntBASIC11.84□□□□□ -0.51
Vma21Q78T54 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.84□□□□□ -0.51
Vma21Q78T54 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Vma21Q78T54 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Gm9726-201ENSMUST00000180321 678 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 Gm21362-201ENSMUST00000194272 928 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.83□□□□□ -0.52
Vma21Q78T54 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vma21Q78T54 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vma21Q78T54 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.82□□□□□ -0.52
Vma21Q78T54 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm9103-201ENSMUST00000119371 405 ntBASIC11.82□□□□□ -0.52
Vma21Q78T54 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.82□□□□□ -0.52
Vma21Q78T54 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms