Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm3436-201ENSMUST00000179930 840 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm24543-201ENSMUST00000103867 82 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm18062-201ENSMUST00000208020 547 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm6007-201ENSMUST00000208170 823 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm18055-201ENSMUST00000208254 547 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 AC149588.3-201ENSMUST00000227515 150 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm44719-201ENSMUST00000206404 149 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Gm42632-201ENSMUST00000201707 2411 ntBASIC4.94□□□□□ -1.62
Syne1Q6ZWR6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm20445-201ENSMUST00000061905 565 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm9899-201ENSMUST00000065519 555 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm5479-201ENSMUST00000160578 435 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm6745-201ENSMUST00000199216 526 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 AC166349.1-201ENSMUST00000220866 695 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Gm18049-201ENSMUST00000208909 581 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC4.93□□□□□ -1.62
Syne1Q6ZWR6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms