Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm12882-201ENSMUST00000121696 517 ntBASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Gm44855-201ENSMUST00000205725 362 ntBASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Gm7488-201ENSMUST00000117148 684 ntBASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Gm6916-202ENSMUST00000205523 195 ntBASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Carlr-201ENSMUST00000181515 2574 ntBASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx58Q6Q899 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Syt7-205ENSMUST00000224135 1557 ntBASIC17.9■□□□□ 0.46
Ddx58Q6Q899 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx58Q6Q899 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.89■□□□□ 0.46
Ddx58Q6Q899 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ddx58Q6Q899 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ddx58Q6Q899 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx58Q6Q899 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms