Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm12742-201ENSMUST00000117326 410 ntBASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm5279-201ENSMUST00000199575 745 ntBASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snrnp40Q6PE01 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm10275-202ENSMUST00000168697 495 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm18307-201ENSMUST00000206864 949 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm45841-201ENSMUST00000207700 164 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm10275-201ENSMUST00000092620 635 ntBASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snrnp40Q6PE01 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Gm21470-201ENSMUST00000187680 696 ntBASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.69□□□□□ -0.38
Snrnp40Q6PE01 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms