Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd4Q6PDQ2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd4Q6PDQ2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Gm15824-201ENSMUST00000119516 955 ntBASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Gm2445-201ENSMUST00000182798 989 ntBASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd4Q6PDQ2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm15429-201ENSMUST00000151268 798 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Snora78-201ENSMUST00000158630 128 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms