Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col11a2Q64739 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.23■□□□□ 0.35
Col11a2Q64739 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col11a2Q64739 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.22■□□□□ 0.35
Col11a2Q64739 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Olfr284-202ENSMUST00000206647 966 ntBASIC17.22■□□□□ 0.35
Col11a2Q64739 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.22■□□□□ 0.35
Col11a2Q64739 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a2Q64739 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col11a2Q64739 Gm15808-201ENSMUST00000119046 604 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm3786-201ENSMUST00000202659 378 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Cts7-204ENSMUST00000225321 1257 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm1335-201ENSMUST00000121653 386 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Mir7070-201ENSMUST00000183657 86 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm29199-201ENSMUST00000187766 775 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.21■□□□□ 0.35
Col11a2Q64739 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
Col11a2Q64739 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a2Q64739 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Col11a2Q64739 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col11a2Q64739 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col11a2Q64739 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col11a2Q64739 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.2■□□□□ 0.34
Col11a2Q64739 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col11a2Q64739 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col11a2Q64739 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.2■□□□□ 0.34
Col11a2Q64739 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.2■□□□□ 0.34
Col11a2Q64739 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.2■□□□□ 0.34
Col11a2Q64739 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.2■□□□□ 0.34
Col11a2Q64739 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Col11a2Q64739 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a2Q64739 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.19■□□□□ 0.34
Col11a2Q64739 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm6334-201ENSMUST00000207083 228 ntBASIC17.19■□□□□ 0.34
Col11a2Q64739 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.19■□□□□ 0.34
Col11a2Q64739 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.19■□□□□ 0.34
Col11a2Q64739 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a2Q64739 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms