Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn1Q64347 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clcn1Q64347 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn1Q64347 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Clcn1Q64347 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn1Q64347 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clcn1Q64347 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clcn1Q64347 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn1Q64347 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn1Q64347 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn1Q64347 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Gm8515-201ENSMUST00000194852 576 ntBASIC18.33■□□□□ 0.52
Clcn1Q64347 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clcn1Q64347 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn1Q64347 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm21854-201ENSMUST00000179901 471 ntBASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm18018-201ENSMUST00000198273 408 ntBASIC18.32■□□□□ 0.52
Clcn1Q64347 Olfr286-202ENSMUST00000205305 969 ntBASIC18.32■□□□□ 0.52
Clcn1Q64347 Gm45668-201ENSMUST00000211271 493 ntBASIC18.32■□□□□ 0.52
Clcn1Q64347 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.32■□□□□ 0.52
Clcn1Q64347 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clcn1Q64347 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn1Q64347 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn1Q64347 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn1Q64347 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.31■□□□□ 0.52
Clcn1Q64347 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn1Q64347 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Gm9797-201ENSMUST00000052902 613 ntBASIC18.31■□□□□ 0.52
Clcn1Q64347 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn1Q64347 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
Clcn1Q64347 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Clcn1Q64347 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn1Q64347 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms