Protein–RNA interactions for Protein: Q62559

Ift52, Intraflagellar transport protein 52 homolog, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift52Q62559 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Ift52Q62559 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Ift52Q62559 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ift52Q62559 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift52Q62559 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.02□□□□□ -0.17
Ift52Q62559 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Ift52Q62559 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ift52Q62559 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.02□□□□□ -0.17
Ift52Q62559 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.02□□□□□ -0.17
Ift52Q62559 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.02□□□□□ -0.17
Ift52Q62559 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.02□□□□□ -0.17
Ift52Q62559 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift52Q62559 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ift52Q62559 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.01□□□□□ -0.17
Ift52Q62559 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.01□□□□□ -0.17
Ift52Q62559 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ift52Q62559 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Gm27622-201ENSMUST00000183779 60 ntBASIC14.01□□□□□ -0.17
Ift52Q62559 Mir7023-201ENSMUST00000185093 64 ntBASIC14.01□□□□□ -0.17
Ift52Q62559 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.01□□□□□ -0.17
Ift52Q62559 Gm29541-201ENSMUST00000191351 678 ntBASIC14.01□□□□□ -0.17
Ift52Q62559 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ift52Q62559 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Ift52Q62559 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ift52Q62559 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift52Q62559 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ift52Q62559 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14□□□□□ -0.17
Ift52Q62559 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ift52Q62559 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ift52Q62559 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14□□□□□ -0.17
Ift52Q62559 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Gm5566-201ENSMUST00000116118 459 ntBASIC14□□□□□ -0.17
Ift52Q62559 Gm13823-201ENSMUST00000119930 345 ntBASIC14□□□□□ -0.17
Ift52Q62559 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14□□□□□ -0.17
Ift52Q62559 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14□□□□□ -0.17
Ift52Q62559 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ift52Q62559 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift52Q62559 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms