Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm4804-201ENSMUST00000182234 999 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.37□□□□□ -0.27
VcanQ62059 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.37□□□□□ -0.27
VcanQ62059 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.37□□□□□ -0.27
VcanQ62059 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.37□□□□□ -0.27
VcanQ62059 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VcanQ62059 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VcanQ62059 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Gm2451-201ENSMUST00000199447 999 ntBASIC13.37□□□□□ -0.27
VcanQ62059 Gm10290-201ENSMUST00000200451 999 ntBASIC13.37□□□□□ -0.27
VcanQ62059 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.37□□□□□ -0.27
VcanQ62059 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Gm4909-201ENSMUST00000118749 794 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.36□□□□□ -0.27
VcanQ62059 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VcanQ62059 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VcanQ62059 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Gm11628-201ENSMUST00000117568 171 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Gm14381-201ENSMUST00000122105 414 ntBASIC13.36□□□□□ -0.27
VcanQ62059 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Gm38671-201ENSMUST00000200573 130 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.36□□□□□ -0.27
VcanQ62059 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VcanQ62059 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
VcanQ62059 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VcanQ62059 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VcanQ62059 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.35□□□□□ -0.27
VcanQ62059 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.35□□□□□ -0.27
VcanQ62059 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VcanQ62059 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.35□□□□□ -0.27
VcanQ62059 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.35□□□□□ -0.27
VcanQ62059 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Gm1335-201ENSMUST00000121653 386 ntBASIC13.35□□□□□ -0.27
VcanQ62059 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms