Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcf4Q60722 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tcf4Q60722 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.11■□□□□ 0.01
Tcf4Q60722 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm5479-201ENSMUST00000160578 435 ntBASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm43514-201ENSMUST00000198852 424 ntBASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.11■□□□□ 0.01
Tcf4Q60722 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Tcf4Q60722 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tcf4Q60722 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcf4Q60722 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
Tcf4Q60722 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.1■□□□□ 0.01
Tcf4Q60722 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Gm27920-201ENSMUST00000183953 96 ntBASIC15.1■□□□□ 0.01
Tcf4Q60722 Gm5264-201ENSMUST00000190584 848 ntBASIC15.1■□□□□ 0.01
Tcf4Q60722 Gm6443-201ENSMUST00000203599 874 ntBASIC15.1■□□□□ 0.01
Tcf4Q60722 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tcf4Q60722 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tcf4Q60722 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.1■□□□□ 0.01
Tcf4Q60722 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tcf4Q60722 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcf4Q60722 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.1■□□□□ 0.01
Tcf4Q60722 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.09■□□□□ 0.01
Tcf4Q60722 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm6973-201ENSMUST00000117080 721 ntBASIC15.09■□□□□ 0.01
Tcf4Q60722 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.09■□□□□ 0.01
Tcf4Q60722 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm45098-201ENSMUST00000207179 657 ntBASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.09■□□□□ 0.01
Tcf4Q60722 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcf4Q60722 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcf4Q60722 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms