Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prdm1Q60636 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prdm1Q60636 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prdm1Q60636 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Prdm1Q60636 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Prdm1Q60636 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prdm1Q60636 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.96■□□□□ 0.3
Prdm1Q60636 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prdm1Q60636 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Prdm1Q60636 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Prdm1Q60636 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.95■□□□□ 0.3
Prdm1Q60636 Gm9824-201ENSMUST00000178707 561 ntBASIC16.95■□□□□ 0.3
Prdm1Q60636 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.95■□□□□ 0.3
Prdm1Q60636 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Prdm1Q60636 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.95■□□□□ 0.3
Prdm1Q60636 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Prdm1Q60636 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prdm1Q60636 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prdm1Q60636 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.94■□□□□ 0.3
Prdm1Q60636 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Gm23547-201ENSMUST00000158210 271 ntBASIC16.94■□□□□ 0.3
Prdm1Q60636 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Gm10253-201ENSMUST00000194270 940 ntBASIC16.94■□□□□ 0.3
Prdm1Q60636 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prdm1Q60636 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm1Q60636 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prdm1Q60636 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.93■□□□□ 0.3
Prdm1Q60636 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prdm1Q60636 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.93■□□□□ 0.3
Prdm1Q60636 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.93■□□□□ 0.3
Prdm1Q60636 Gm18766-201ENSMUST00000189811 808 ntBASIC16.93■□□□□ 0.3
Prdm1Q60636 Gm18049-201ENSMUST00000208909 581 ntBASIC16.93■□□□□ 0.3
Prdm1Q60636 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Prdm1Q60636 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm1Q60636 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
Prdm1Q60636 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm1Q60636 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Gm13823-201ENSMUST00000119930 345 ntBASIC16.92■□□□□ 0.3
Prdm1Q60636 Gm13616-201ENSMUST00000120600 222 ntBASIC16.92■□□□□ 0.3
Prdm1Q60636 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm1Q60636 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm1Q60636 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm1Q60636 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm1Q60636 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Prdm1Q60636 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms