Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm27646-201ENSMUST00000183989 110 ntBASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm6296-201ENSMUST00000222599 943 ntBASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm10231-201ENSMUST00000181584 441 ntBASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm10175-202ENSMUST00000208752 441 ntBASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms